GENE-counter specifications


Unique identifier OMICS_01404
Name GENE-counter
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Programming languages C++, Perl, R
Database management system MySQL
Computer skills Advanced
Stability Stable
Maintained Yes


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  • person_outline Jeff Chang <>

Publication for GENE-counter

GENE-counter institution(s)
Department of Botany and Plant Pathology, Oregon State University, Corvallis, OR, USA; Molecular and Cellular Biology Program, Oregon State University, Corvallis, OR, USA; Department of Statistics, Oregon State University, Corvallis, OR, USA; Center for Genome Research and Biocomputing, Oregon State University, Corvallis, OR, USA
GENE-counter funding source(s)
Supported in part by Oregon State University (OSU) and the National Research Initiative Competitive Grant no. 2008-35600-18783 from the USDA’s National Institute of Food and Agriculture, Microbial Functional Genomics Program, National Science Foundation (MCB-0618433) and National Institutes of Health (AI43288), and OSU and the Department of Energy’s Plant Feedstock Genomics for Bioenergy grant DE-FG02-08ER64630 and by Computational and Genome Biology Initiative Fellowships from OSU.

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