Gene expression analysis steps

Bioinformatics tools

Databases

Transcript abundance is in many ways an extraordinary phenotype, with special attributes that confer particular importance on an understanding of its genetics. The primary transformative potential of genome-wide gene expression genetics is the sheer number of traits —…

Gene expression analysis software tools and databases

Most Recent Tools

Desktop app
A A A alignment of pattern… alignment of pattern matrices score

ALPS alignment of pattern matrices score

Classifies ncRNAs by using primary information from a deep sequencing…

Classifies ncRNAs by using primary information from a deep sequencing experiment, i.e. the relative positions and lengths of reads. ALPS is not designed to recognize a certain class of ncRNA, it can…

A A A clipper clipper

clipper

Implements topological gene set analysis using a two-step empirical approach.…

Implements topological gene set analysis using a two-step empirical approach. clipper exploits graph decomposition theory to create a junction tree and reconstruct the most relevant signal path. In…

Web app
Desktop app
A A A FrameDP FrameDP

FrameDP

Predicts Coding Data Sequence in transcripts. FrameDP can adapt itself to…

Predicts Coding Data Sequence in transcripts. FrameDP can adapt itself to different levels of sequence qualities. It provides an automatic protein description based on InterPro domain content. The…

Desktop app
A A A GeneAnswers GeneAnswers

GeneAnswers

Provides an integrated solution for a group of genes and specified categories…

Provides an integrated solution for a group of genes and specified categories (biological or medical functions, such as Gene Ontology, Disease Ontology, KEGG, etc) to reveal the potential…

Most Popular Tools

Web app
A A A Enrichr Enrichr

Enrichr

An integrative web-based and mobile software application that includes new…

An integrative web-based and mobile software application that includes new gene-set libraries, an alternative approach to rank enriched terms, and various interactive visualization approaches to…

Web app
A A A Riboswitch Scanner Riboswitch Scanner

Riboswitch Scanner

Detects riboswitches from genomic sequences with high sensitivity and…

Detects riboswitches from genomic sequences with high sensitivity and specificity. Riboswitch Scanner uses a method based on profile Hidden Markov Models (pHMMs) for detecting riboswitches.…

Web app
Genevestigator Genevestigator

Genevestigator

An innovative online platform to help you interpret your results, prioritize…

An innovative online platform to help you interpret your results, prioritize targets and biomarkers, identify correlated genes, discover novel disease-specific genes, or simply to explore the…

Web app
A A A g:Profiler g:Profiler

g:Profiler

A popular collection of web tools for functional analysis. g:GOSt and g:Cocoa…

A popular collection of web tools for functional analysis. g:GOSt and g:Cocoa combine comprehensive methods for interpreting gene lists, ordered lists and list collections in the context of…

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