Gene expression analysis steps

Bioinformatics tools

Databases

Transcript abundance is in many ways an extraordinary phenotype, with special attributes that confer particular importance on an understanding of its genetics. The primary transformative potential of genome-wide gene expression genetics is the sheer number of traits —…

Gene expression analysis software tools and databases

Most Recent Tools

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EeelBase
Data

EeelBase

Provides picture of the genomic transcriptional activity of this economically…

Provides picture of the genomic transcriptional activity of this economically important but endangered species. EeelBase is a dedicated database of annotated transcriptome sequences of the European…

xCell
Web

xCell

Performs cell type enrichment analysis from gene expression data for 64 immune…

Performs cell type enrichment analysis from gene expression data for 64 immune and stroma cell types. xCell is a gene signatures-based method learned from thousands of pure cell types from various…

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MIGSA
Desktop

MIGSA Massive and Integrative Gene Set Analysis

Allows to perform a massive and integrative gene set analysis over several…

Allows to perform a massive and integrative gene set analysis over several expression and gene sets simultaneously. MIGSA provides a common gene expression analytic framework that grants a…

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MICA-SVM
Web

Most Popular Tools

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Enrichr
Web

Enrichr

An integrative web-based and mobile software application that includes new…

An integrative web-based and mobile software application that includes new gene-set libraries, an alternative approach to rank enriched terms, and various interactive visualization approaches to…

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Riboswitch…
Web

Riboswitch Scanner

Detects riboswitches from genomic sequences with high sensitivity and…

Detects riboswitches from genomic sequences with high sensitivity and specificity. Riboswitch Scanner uses a method based on profile Hidden Markov Models (pHMMs) for detecting riboswitches.…

Genevestigator
Web

Genevestigator

An innovative online platform to help you interpret your results, prioritize…

An innovative online platform to help you interpret your results, prioritize targets and biomarkers, identify correlated genes, discover novel disease-specific genes, or simply to explore the…

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g:Profiler
Web

g:Profiler

A popular collection of web tools for functional analysis. g:GOSt and g:Cocoa…

A popular collection of web tools for functional analysis. g:GOSt and g:Cocoa combine comprehensive methods for interpreting gene lists, ordered lists and list collections in the context of…

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