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Gene Expression Open Source System GEOSS

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Alternative name: GeneX Va

Stores and analyzes gene expression data. GEOSS is an open source gene expression data management system that provides a relational database, a web interface, and an analysis suite. This resource is a multiuser archive for gene chip data and a powerful analysis tool for end users. It includes workflow management features for the microarray center, and for the individual research labs.

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GEOSS forum

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GEOSS classification

GEOSS specifications

Software type:
Package/Module
Restrictions to use:
None
Programming languages:
Perl, R
Computer skills:
Advanced
Maintained:
Yes
Interface:
Command line interface
Operating system:
Unix/Linux
License:
GNU General Public License version 2.0
Stability:
Stable

GEOSS distribution

versioning

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No versioning.

GEOSS support

Maintainer

  • Jae Lee <>

Credits

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Publications

Institution(s)

University of Virginia School of Medicine, Charlottesville, VA, USA; Virginia Commonwealth University, Richmond, VA, USA; George Mason University, Manassas, VA, USA

Funding source(s)

Supported by Virginia’s Commonwealth Technology Research Fund (CTRF) grant, Center for Innovative Technology (CIT) grant BIO-02-004, and the University of Virginia Pratt Fund.

Link to literature

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