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Links human genes to the body parts they affect. Gene ORGANizer is built upon an exhaustive curated database that links more than 7,000 genes to approximately 150 anatomical parts using more than 150,000 gene-organ associations. The tool offers user-friendly platforms to analyze the anatomical effects of individual genes, and identify trends within groups of genes. Gene ORGANizer can be used to make new discoveries and is expected to be useful in a variety of evolutionary, medical and molecular studies aimed at understanding the phenotypic effects of genes.

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Gene ORGANizer classification

  • Animals
    • Homo sapiens

Gene ORGANizer specifications

Software type:
Package
Restrictions to use:
None
Output data:
The body parts significantly enriched or depleted within the gene list, or the organs, systems, regions and germ layers that the gene affects, in an interactive user-friendly body heat map and in a tables
Computer skills:
Basic
Stability:
Stable
Interface:
Web user interface
Input data:
A list of genes or a gene of interest
Database support:
Yes
Version:
12

Gene ORGANizer support

Documentation

Maintainer

  • Liran Carmel <>

Credits

Publications

Institution(s)

Department of Genetics, The Alexander Silberman Institute of Life Sciences, The Hebrew University of Jerusalem, Jerusalem, Israel

Funding source(s)

This work was supported by the Israel Science Foundation FIRST individual grant (ISF 1430/13).

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