GRENDEL specifications

Unique identifier:
OMICS_13531
Software type:
Toolkit/Suite
Restrictions to use:
None
Output data:
Multiple sbml files, one for each rendition of the network, i.e. one for each sample, and a reference file which represents the wildtype; Multiple .prm files, one for each rendition of the network, this format corresponds to an internal representation; A net_topo.csv that is a binary valued adjacency matrix
Operating system:
Unix/Linux
Version:
0.2
Maintained:
Yes
Name:
Gene REgulatory Network Decoding Evaluations tooL
Interface:
Command line interface
Input data:
Degree distributions, parameter distributions, experiment design, noise level
Output format:
XML, CSV
Computer skills:
Advanced
Stability:
Stable

versioning

tutorial arrow
×
Upload and version your source code
Get a DOI for each update to improve tool traceability. Archive your releases so the community can easily visualize progress on your work.
Facilitate your tool traceability
Sign up for free to upload your code and get a DOI

No versioning.

GRENDEL distribution

download

GRENDEL support

Maintainer

  • Michael Brent <>

forum

tutorial arrow
×
Communicate with other users
Participate in the forum to get support for using tools. Ask questions about technical specifications.
Take part in the discussion
Sign up for free to ask question and share your advices

No open topic.

Credits

tutorial arrow
×
Promote your skills
Define all the tasks you managed and assign your profile the appropriate badges. Become an active member.
Promote your work
Sign up for free to badge your contributorship

Publications

Institution(s)

Center for Genome Sciences and Department of Computer Science, Washington University, St Louis, MO, USA

Funding source(s)

National Human Genome Research Institute (grant T32 HG000045) and Washington University

User review

tutorial arrow
×
Vote up tools and offer feedback
Give value to tools and make your expertise visible
Give your feedback on this tool
Sign up for free to join and share with the community

0 user reviews

star_border star_border star_border star_border star_border
star star star star star

0 user reviews

star_border star_border star_border star_border star_border
star star star star star

No review has been posted.

Related Tools