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GSEA | A knowledge-based approach for interpreting genome-wide expression profiles

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A computational method that determines whether an a priori defined set of genes shows statistically significant, concordant differences between two biological states (e.g. phenotypes). GSEA derives its power by focusing on gene sets, that is, groups of genes that share common biological function, chromosomal location, or regulation.

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2 user reviews

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2 user reviews

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Arup Ghosh's avatar image Arup Ghosh's country flag

Arup Ghosh

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The best free tool available for hassle-free gene set enrichment analysis.

alisalehzadeh's avatar image alisalehzadeh's country flag

alisalehzadeh

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This approach created a new way of thinking in gene expression analysis

GSEA forum

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GSEA classification

GSEA specifications

Unique identifier:
OMICS_02279
Software type:
Package/Module
Restrictions to use:
None
Programming languages:
Java, R
Version:
5.0
Maintained:
Yes
Name:
Gene Set Enrichment Analysis
Interface:
Command line interface, Graphical user interface
Operating system:
Unix/Linux
Computer skills:
Advanced
Stability:
Stable

GSEA distribution

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No versioning.

GSEA support

Maintainer

  • GSEA <>

Credits

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Publications

Institution(s)

Broad Institute of Massachusetts Institute of Technology and Harvard, Cambridge, MA, USA

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