GeneChaser statistics

info info

Citations per year

Number of citations per year for the bioinformatics software tool GeneChaser

Tool usage distribution map

This map represents all the scientific publications referring to GeneChaser per scientific context
info info

Associated diseases


Popular tool citations

chevron_left Unclassified tools chevron_right
Want to access the full stats & trends on this tool?

GeneChaser specifications


Unique identifier OMICS_04083
Name GeneChaser
Interface Web user interface
Restrictions to use None
Computer skills Basic
Stability No
Maintained No

Publication for GeneChaser

GeneChaser citations


The CO Regulation Database (CORD): A Tool to Identify Coordinately Expressed Genes

PLoS One
PMCID: 3944024
PMID: 24599084
DOI: 10.1371/journal.pone.0090408

[…] differentially regulated or determining gene-gene correlation using expression value across a defined microarray platform. Several gene-centered added-value databases are freely assessable including GeneChaser and the Gene Expression Atlas , . Both these tools allow the operator to assess in which experiments a gene may be differentially expressed. COXPRESdb and the Multi-experiment Matrix are tw […]


A Novel Protein Kinase Like Domain in a Selenoprotein, Widespread in the Tree of Life

PLoS One
PMCID: 3281104
PMID: 22359664
DOI: 10.1371/journal.pone.0032138

[…] Gs tested (all that were observed in the SELO neighbourhoods).Gene coexpression was studied using the STRING tool . Gene expression data was extracted for SELO genes using the BioGPS system , and the Genechaser and GEO databases , . […]


Immune Response and Mitochondrial Metabolism Are Commonly Deregulated in DMD and Aging Skeletal Muscle

PLoS One
PMCID: 3212519
PMID: 22096509
DOI: 10.1371/journal.pone.0026952

[…] We identified GEO public datasets in which significant expression variations were observed using GeneChaser server . […]


Discovering biological connections between experimental conditions based on common patterns of differential gene expression

BMC Bioinformatics
PMCID: 3203354
PMID: 21951600
DOI: 10.1186/1471-2105-12-381

[…] nally, we chose to compare openSESAME with two other methods that relate gene expression differences in GEO-deposited data to a query signature. One of the key differences between openSESAME and both GeneChaser [] and MARQ [] is that, unlike openSESAME, these methods precompute the degree of differential expression associated with phenotypic comparisons gleaned from sample annotation information t […]


Computational Integration of Homolog and Pathway Gene Module Expression Reveals General Stemness Signatures

PLoS One
PMCID: 3084730
PMID: 21559491
DOI: 10.1371/journal.pone.0018968

[…] es with large-scale efforts to systematically extract differentially expressed genes in many different conditions represented in current microarray gene expression repositories, such as Oncomine and GeneChaser . It is complementary to previous approaches to uncover the mechanisms of pluri- and multi-potency maintenance, such as the development of the PluriNet .In this study, we focused our analys […]


Meta analysis of muscle transcriptome data using the MADMuscle database reveals biologically relevant gene patterns

BMC Genomics
PMCID: 3049149
PMID: 21324190
DOI: 10.1186/1471-2164-12-113

[…] for review]. A major problem was the low amount of meaningful raw data deposited in public databases []. A more advanced comparison strategy of significant gene lists was provided by Oncomine [] and GeneChaser (GENE CHAnge browSER) []. Oncomine is a comprehensive and expertly annotated database of gene expression studies. The collection comprises 25,447 samples in 360 experiments taken from 40 ca […]

Want to access the full list of citations?
GeneChaser institution(s)
Stanford Center for Biomedical Informatics Research, Department of Medicine, Stanford University School of Medicine, Stanford, CA, USA

GeneChaser reviews

star_border star_border star_border star_border star_border
star star star star star

Be the first to review GeneChaser