GeneHub-GEPIS statistics

Tool stats & trends

Looking to identify usage trends or leading experts?

GeneHub-GEPIS specifications

Information


Unique identifier OMICS_07310
Name GeneHub-GEPIS
Interface Web user interface
Restrictions to use None
Computer skills Basic
Stability No
Maintained No

Taxon


  • Primates
    • Homo sapiens
  • Rodents
    • Mus musculus

Publication for GeneHub-GEPIS

GeneHub-GEPIS citations

 (6)
library_books

FOXE3 contributes to Peters anomaly through transcriptional regulation of an autophagy associated protein termed DNAJB1

2016
Nat Commun
PMCID: 4820811
PMID: 27218149
DOI: 10.1038/ncomms10953

[…] of dnajb1b appears to be predominantly localized to the lens (http://zfin.org). It is important to note that human DNAJB1 is expressed ubiquitously (http://research-public.gene.com/Research/genentech/genehub-gepis/genehub-gepis-search.html), which is similar to dnajb1a in zebrafish. Therefore, to more accurately recapitulate human phenotype mimicking symptoms of PA, we decided to target dnajb1a be […]

library_books

Mutations in the latent TGF beta binding protein 3 (LTBP3) gene cause brachyolmia with amelogenesis imperfecta

2015
Hum Mol Genet
PMCID: 4424950
PMID: 25669657
DOI: 10.1093/hmg/ddv053

[…] express, http://www.eurexpress.org/ee/Exome Variant Server (EVS) http://evs.gs.washington.edu/EVS/GenBank, http://www.ncbi.nlm.nih.gov/GenbankGeneHub-GEPIS, http://www.cgl.ucsf.edu/Research/genentech/genehub-gepis/genehubgepis-search.htmlGene expression in tooth, http://bite-it.helsinki.fiGenePaint, http://www.genepaint.orgHSF2.4.1, http://www.umd.be/HSFNCBI, http://www.ncbi.nlm.nih.gov/Online Men […]

library_books

Comparative analysis of differential network modularity in tissue specific normal and cancer protein interaction networks

2013
J Clin Bioinforma
PMCID: 3852839
PMID: 24093757
DOI: 10.1186/2043-9113-3-19

[…] The primary data required were retrieved from differential expression database GeneHub-GEPIS (an online bioinformatics tool for inferring gene expression patterns in a large panel of normal and cancer tissues; http://research-public.gene.com/Research/genentech/genehub-gepis/inde […]

library_books

Identification of a KEAP1 Germline Mutation in a Family with Multinodular Goitre

2013
PLoS One
PMCID: 3665763
PMID: 23724128
DOI: 10.1371/journal.pone.0065141

[…] ion of this gene in the thyroid was suggested to be considerably low based on several databases including BioGPS (http://biogps.org/), Cancer Genome Anatomy Project (http://cgap.nci.nih.gov/SAGE) and GeneHub-GEPIS (http://research-public.gene.com/Research/genentech/genehub-gepis/). These results suggested that the variant in MUC16 could not be a significant candidate of causative mutation of the M […]

library_books

Genome Wide Association Analysis of Ischemic Stroke in Young Adults

2011
PMCID: 3276159
PMID: 22384361
DOI: 10.1534/g3.111.001164

[…] on (). Although the function of this gene is largely unknown, the gene is highly expressed in the brain and other central/peripheral nervous system tissues (http://www.cgl.ucsf.edu/Research/genentech/genehub-gepis/index.html) () and is conserved in different species (http://www.ncbi.nlm.nih.gov/sites/homologene). A microdeletion on chromosome 2q region involving FMNL2 has previously been implicate […]

library_books

Identification of Novel Pax8 Targets in FRTL 5 Thyroid Cells by Gene Silencing and Expression Microarray Analysis

2011
PLoS One
PMCID: 3179481
PMID: 21966443
DOI: 10.1371/journal.pone.0025162

[…] n. Genes differentially expressed in siPax8 vs. controls were ranked according to their specific expression in thyroid tissue, using the BioGps gene annotation portal (http://biogps.gnf.org) and the GeneHub Gepis bioinformatics tool (http://www.cgl.ucsf.edu/Research/genentech/genehub-gepis). Genes mostly expressed in either fetal or adult thyroid were selected for the TFBS analysis using the web- […]

Citations

Looking to check out a full list of citations?

GeneHub-GEPIS institution(s)
Department of Bioinformatics, Genentech, Inc, South San Francisco, CA, USA

GeneHub-GEPIS reviews

star_border star_border star_border star_border star_border
star star star star star

Be the first to review GeneHub-GEPIS