GeneMerge pipeline

GeneMerge specifications

Information


Unique identifier OMICS_18902
Name GeneMerge
Interface Web user interface
Restrictions to use Academic or non-commercial use
Input data A study set gene file; a population set gene file; a gene-association file and a description file.
Output format TXT
Programming languages Perl
Computer skills Basic
Stability Stable
Maintained Yes

Documentation


Maintainer


  • person_outline Cristian Castillo-Davis <>

Additional information


Manual: http://www.genemerge.net/GeneMerge1.4-Manual.pdf

Information


Unique identifier OMICS_18902
Name GeneMerge
Software type Application/Script
Interface Command line interface
Restrictions to use Academic or non-commercial use
Input data A study set gene file; a population set gene file; a gene-association file and a description file.
Output format TXT
Operating system Unix/Linux, Mac OS, Windows
Programming languages Perl
Computer skills Advanced
Version 1.4
Stability Stable
Source code URL http://www.genemerge.net/GeneMerge1.4.tar.gz
Maintained Yes

Download


Versioning


Add your version

Documentation


Maintainer


  • person_outline Cristian Castillo-Davis <>

Additional information


Manual: http://www.genemerge.net/GeneMerge1.4-Manual.pdf

Publication for GeneMerge

GeneMerge IN pipeline

2010
PMCID: 3055267
PMID: 20663190
DOI: 10.1186/1471-2148-10-227

[…] in the t. dalmanni est database or the homologous regions for d. melanogaster to the frequency of each repeat using a chi-squared goodness of fit test. for the t. dalmanni repeat genes, we then used genemerge with bonferroni adjustment [39] to determine if the molecular function represented a nonrandom sample of the putative protein-coding genes in the est database., to assess variation […]

GeneMerge institution(s)
Department of Organismic and Evolutionary Biology, Harvard University, Biological Laboratories, Cambridge, MA, USA

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