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GeneNetworkBuilder

A package for discovering direct or indirect targets of transcription factors using ChIP-chip or ChIP-seq, and microarray or RNA-seq gene expression data. Inputting a list of genes of potential targets of one TF from ChIP-chip or ChIP-seq, and the gene expression results, GeneNetworkBuilder generates a regulatory network of the TF.

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GeneNetworkBuilder forum

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GeneNetworkBuilder classification

GeneNetworkBuilder specifications

Unique identifier:
OMICS_01971
Interface:
Command line interface
Operating system:
Unix/Linux, Mac OS, Windows
License:
GNU General Public License version 2.0
Stability:
Stable
Software type:
Package/Module
Restrictions to use:
None
Programming languages:
R
Computer skills:
Advanced
Maintained:
Yes

GeneNetworkBuilder distribution

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GeneNetworkBuilder support

Documentation

By using OMICtools you acknowledge that you have read and accepted the terms of the end user license agreement.