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GenePath specifications


Unique identifier OMICS_25686
Name GenePath
Interface Web user interface
Restrictions to use None
License GNU General Public License version 3.0
Computer skills Basic
Stability Stable
Maintained Yes


  • person_outline Blaž Zupan

Publications for GenePath

GenePath citations


GWAS of epigenetic aging rates in blood reveals a critical role for TERT

Nat Commun
PMCID: 5786029
PMID: 29374233
DOI: 10.1038/s41467-017-02697-5

[…] ut the masnucript are: 1000 genome project,, DNAm age,, ENGAGE,, EIGENSTRAT,, GTEx,, GIANT,, HaploReg, […]


Milk Intake at Midlife and Cognitive Decline over 20 Years. The Atherosclerosis Risk in Communities (ARIC) Study

PMCID: 5691750
PMID: 29039795
DOI: 10.3390/nu9101134

[…] he imputation from the reference panel. The final sample with genetic data used for imputation was 9713 Whites and 2871 Blacks. Principal components were generated using the Eigensoft package (, and ancestry outliers were removed. The final sample with genetic data used for imputation was 9713 Whites and 2871 Blacks. […]


Genetic architecture of epigenetic and neuronal ageing rates in human brain regions

Nat Commun
PMCID: 5454371
PMID: 28516910
DOI: 10.1038/ncomms15353

[…] 1000 Genome project,, age,,,,, http://hrs […]


Population genomics identifies the origin and signatures of selection of South Korean weedy rice

Plant Biotechnol J
PMCID: 5316921
PMID: 27589078
DOI: 10.1111/pbi.12630

[…] , ), to generate the population structure. For positive selection, we used VCFtools (Danecek et al., ) for nucleotide diversity and F ST analysis. We performed XP‐CLR using the XP‐CLR program ( XP‐EHH and iHS were performed by using selscan software (Szpiech and Hernandez, ). […]


An Outbreak of Infections Caused by a Klebsiella pneumoniae ST11 Clone Coproducing Klebsiella pneumoniae Carbapenemase 2 and RmtB in a Chinese Teaching Hospital

PMCID: 5009584
PMID: 27569227
DOI: 10.4103/0366-6999.189049

[…] The GenePath System from Bio-Rad Laboratories (Hercules, CA, USA) was used for PFGE analysis, and the genomic DNA was prepared according to the manufacturer's instructions. In brief, the genomic DNA was p […]


Longitudinal relationships between glycemic status and body mass index in a multiethnic study: evidence from observational and genetic epidemiology

Sci Rep
PMCID: 4969745
PMID: 27480816
DOI: 10.1038/srep30744
call_split See protocol

[…] f these 17394 individuals, 9297 have been prospectively followed for a median of 3.3 years (). Self-reported ethnicity has been validated in the 17394 individuals using the eigensoft software ( The EpiDREAM study was approved by local ethics committees. All experimental protocols were approved by McMaster University and were performed in accorda […]


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GenePath institution(s)
Faculty of Computer and Information Science, University of Ljubljana, Ljubljana, Slovenia; Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX, USA
GenePath funding source(s)
Supported in part by a grant from the Slovene Ministry of Education, Science and Sports and by a grant from the National Institute of Child Health and Human Development, P01 HD39691.

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