GenePix Pro specifications


Unique identifier OMICS_00840
Name GenePix Pro
Software type Package/Module
Interface Graphical user interface
Restrictions to use License purchase required
Operating system Unix/Linux
License Commercial
Computer skills Medium
Stability Stable
Maintained Yes


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GenePix Pro citations

PMCID: 5724888

[…] contained 43,815 gene sequences for 45,220 probes on a 4x44 microarray slide. after washing, the slides were scanned using genepix personal 4100a (axon, sunnyvale, ca) and scored by genepix pro (sunnyvale, ca). the spots representing impartial hybridizations (non-uniform intensity) and over hybridizations (too bright) were removed before normalization of the data., in all, 24 […]

PMCID: 5206632

[…] for all arrays of an experimental series. relevant parameters, such as concordance of the two colour detection channels, were carefully validated throughout. spot segmentation was performed with genepix pro 6.0 (molecular devices, union city, usa). the mean local background intensity was subtracted from the mean signal intensity for each spot to obtain background-corrected signal […]

PMCID: 4312595

[…] 5 m in 5xssc, 0.1%sds and 0.1 mg/ml bsa. microarray hybridizations and washings were done in manual chambers at 42°c, according to forment et al. [50]. scanning and image analysis was performed using genepix pro 6.0 software (molecular devices)., for wild type vs. wild type + glyphosate, two biological replicates were done. expression ratios in both microarrays were averaged and considered for fur […]

PMCID: 3778901

[…] kit. samples were run on ark genomics 17k bovine cdna array, with hybridisation performed using a tecan hs400™ pro hybridisation machine. slides were scanned on an axon genepix 4000a scanner using genepix pro 6 software. data were subsequently analysed using the genepix pro 6 software and followed by r (version2.5.0) and limma (version 2.9.17) software. normalisation of data was performed […]

PMCID: 3415453

[…] labeling. hybridization and washing of the arrays was carried according to manufacturer-supplied protocol. the arrays were scanned on a genepix 4000b microarray scanner, and raw data extracted using genepix pro software (version 6)., we used the bioconductor package limma [70] for analysis of our microarray data. array quality was checked for parameters such as uniform background and foreground […]

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