Genestack statistics

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Citations per year

Number of citations per year for the bioinformatics software tool Genestack
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Genestack specifications

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Unique identifier OMICS_01218
Name Genestack
Software type Framework/Library
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Parallelization MapReduce
Computer skills Advanced
Stability Stable
High performance computing Yes
Maintained Yes

Versioning


No version available

Maintainer


  • person_outline Genestack Team

Genestack citations

 (2)
library_books

Mutations in EEA1 are associated with allergic bronchopulmonary aspergillosis and affect phagocytosis of Aspergillus fumigatus by human macrophages

2018
PLoS One
PMCID: 5856258
PMID: 29547649
DOI: 10.1371/journal.pone.0185706

[…] at this stage involved an enrichment qPCR (pre-captured vs. post-captured material) and another bioanalayzer run to confirm the library size and concentration. Sequencing results were transferred to Genestack for analysis.Data for 218 (91 ABPA, 127 asthmatic) individuals was analyzed by Genestack. The minimal underlying data set necessary for replication of the study are included in the paper and […]

library_books

An RNA Seq atlas of gene expression in mouse and rat normal tissues

2017
Sci Data
PMCID: 5726313
PMID: 29231921
DOI: 10.1038/sdata.2017.185

[…] the Expression Atlas (https://www.ebi.ac.uk/gxa/home), or commercial tools like the nextbio BaseSpace Correlation Engine (https://www.nextbio.com), Genevestigator (https://www.genevestigator.com) or Genestack (https://www.genestack.com).Although DNA microarrays are still widely used, RNA-Seq by next generation sequencing (NGS) is now the technology of choice for ‘transcriptome wide’ gene expressi […]


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