Genestack statistics

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Citations per year

Number of citations per year for the bioinformatics software tool Genestack

Tool usage distribution map

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Genestack specifications


Unique identifier OMICS_01218
Name Genestack
Software type Framework/Library
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Parallelization MapReduce
Computer skills Advanced
Stability Stable
High performance computing Yes
Maintained Yes


No version available


  • person_outline Genestack Team

Genestack citations


Mutations in EEA1 are associated with allergic bronchopulmonary aspergillosis and affect phagocytosis of Aspergillus fumigatus by human macrophages

PLoS One
PMCID: 5856258
PMID: 29547649
DOI: 10.1371/journal.pone.0185706

[…] at this stage involved an enrichment qPCR (pre-captured vs. post-captured material) and another bioanalayzer run to confirm the library size and concentration. Sequencing results were transferred to Genestack for analysis.Data for 218 (91 ABPA, 127 asthmatic) individuals was analyzed by Genestack. The minimal underlying data set necessary for replication of the study are included in the paper and […]


An RNA Seq atlas of gene expression in mouse and rat normal tissues

Sci Data
PMCID: 5726313
PMID: 29231921
DOI: 10.1038/sdata.2017.185

[…] the Expression Atlas (, or commercial tools like the nextbio BaseSpace Correlation Engine (, Genevestigator ( or Genestack ( DNA microarrays are still widely used, RNA-Seq by next generation sequencing (NGS) is now the technology of choice for ‘transcriptome wide’ gene expressi […]

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