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Codon reassignment detection software tools | RNA modification data analysis

Although the majority of the organisms use the same genetic code to translate DNA, several variants have been described in a wide range of organisms, both in nuclear and organellar systems, many of them corresponding to metazoan mitochondria. These…
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GenDecoder
Web

GenDecoder

Predicts automatically animal mitochondrial genetic codes. GenDecoder returns…

Predicts automatically animal mitochondrial genetic codes. GenDecoder returns detailed information about codon-usage, the frequency of the different amino acids associated with each codon, some…

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CoreTracker
Desktop

CoreTracker

Explores sense-to-sense codon reassignments across any given group of genomes.…

Explores sense-to-sense codon reassignments across any given group of genomes. CoreTracker includes a phylogenetic framework and extends to the context of ambiguous decoding of a codon to various…

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Bagheera
Web
Desktop

Bagheera

Predicts the most probable CUG codon translation for a transcriptome or genome…

Predicts the most probable CUG codon translation for a transcriptome or genome assembly. Bagheera uses extensive reference data to proceed. It allows to examine the correct decoding of existing…

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ORF search &…
Web

ORF search & Translator

Assists user in translation of DNA sequences.

Assists user in translation of DNA sequences.

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Translate
Web

Translate

Provides increased protein family coverage based on the PRINTS database.…

Provides increased protein family coverage based on the PRINTS database. PrePRINTS is an automatically generated database that contains conserved motifs used to characterise a protein family and…

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