Genevar pipeline

Genevar specifications

Information


Unique identifier OMICS_04603
Name Genevar
Alternative name GENe Expression VARiation
Interface Web user interface
Restrictions to use None
Computer skills Basic
Stability Stable
Maintained Yes

Publication for GENe Expression VARiation

Genevar IN pipeline

2014
PMCID: 4197830
PMID: 24980144
DOI: 10.1186/gb-2014-15-6-r88

[…] in additional file 2), taking into account the population to which the highd site was assigned. occurrence of highd and matched sites among expression quantitative trait loci was estimated using the genevar database [32]., weir and cockerham’s fst[49] was calculated using vcftools [50]. fst values were used to evaluate correlation with δdaf values for the same variants in chosen regions., using […]

Genevar institution(s)
Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, UK

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