De novo genome assemblers for Sanger sequencing analysis.
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Staden Package
Desktop

Staden Package

A fully developed set of DNA sequence assembly (Gap4 and Gap5), editing and…

A fully developed set of DNA sequence assembly (Gap4 and Gap5), editing and analysis tools (Spin). The package also covers most of the standard sequence analysis tasks such as restriction site…

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MIRA
Desktop

MIRA Mimicking Intelligent Read Assembly

Sequence assembler and mapper for whole genome shotgun and EST/RNASeq…

Sequence assembler and mapper for whole genome shotgun and EST/RNASeq sequencing data.

G T A T C G C T A
Phrap
Desktop

Phrap

A program for assembling shotgun DNA sequence data. PHRAP uses a combination of…

A program for assembling shotgun DNA sequence data. PHRAP uses a combination of user-supplied and internally computed data quality information to improve assembly accuracy in the presence of repeats.…

CAP3
Web

CAP3

The third generation of the CAP sequence assembly program. The CAP3 program…

The third generation of the CAP sequence assembly program. The CAP3 program includes a number of improvements and new features. The program has a capability to clip 58 and 38 low-quality regions of…

DNA Dragon
Desktop

DNA Dragon

Assembles sequences (FASTA, GenBank etc.), trace data (ABI, SCF, AB1), and…

Assembles sequences (FASTA, GenBank etc.), trace data (ABI, SCF, AB1), and Illumina and Roche 454 flowgrams into contigs.

SeqAssem
Desktop

SeqAssem

Contig sequence assembly software.

Contig sequence assembly software.

ARACHNE
Desktop

ARACHNE

A package for assembling genome sequence using paired-end whole-genome shotgun…

A package for assembling genome sequence using paired-end whole-genome shotgun reads. ARACHNE has several key features, including an efficient and sensitive procedure for finding read overlaps, a…

SeqMan Pro
Desktop

SeqMan Pro

Offers quick and accurate sequence assembly and analysis of Sanger data.

Offers quick and accurate sequence assembly and analysis of Sanger data.

G T A T C G C T A
AMOS
Desktop

AMOS

A collection of tools and class interfaces for the assembly of DNA reads.

A collection of tools and class interfaces for the assembly of DNA reads.

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Celera…
Desktop

Celera assembler

A de novo whole-genome shotgun (WGS) DNA sequence assembler.

A de novo whole-genome shotgun (WGS) DNA sequence assembler.

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