AMOS
AMOS
A collection of tools and class interfaces for the assembly of DNA reads.
A collection of tools and class interfaces for the assembly of DNA reads.
ARACHNE
ARACHNE
It was designed for long Sanger-chemistry reads.
It was designed for long Sanger-chemistry reads.
Celera assembler
Celera assembler
A de novo whole-genome shotgun (WGS) DNA sequence assembler.
A de novo whole-genome shotgun (WGS) DNA sequence assembler.
DNA Dragon
DNA Dragon
Assembles sequences (FASTA, GenBank etc.), trace data (ABI, SCF, AB1), and Illumina and…
Assembles sequences (FASTA, GenBank etc.), trace data (ABI, SCF, AB1), and Illumina and Roche 454 flowgrams into contigs.
Mimicking Intelligent Read Assembly
Mimicking Intelligent Read Assembly
MIRA
Sequence assembler and mapper for whole genome shotgun and EST/RNASeq sequencing data.
Sequence assembler and mapper for whole genome shotgun and EST/RNASeq sequencing data.
Phrap
Phrap
A program for assembling shotgun DNA sequence data.
A program for assembling shotgun DNA sequence data.
SeqAssem
SeqAssem
Contig sequence assembly software.
Contig sequence assembly software.
SeqMan Pro
SeqMan Pro
Offers quick and accurate sequence assembly and analysis of Sanger data.
Offers quick and accurate sequence assembly and analysis of Sanger data.
Staden Package
Staden Package
A fully developed set of DNA sequence assembly (Gap4 and Gap5), editing and analysis…
A fully developed set of DNA sequence assembly (Gap4 and Gap5), editing and analysis tools (Spin). The package also covers most of the standard sequence analysis tasks such as restriction site searching, translation, pattern searching, comparison,…