Genome editing software tools and databases

Genome editing steps

Bioinformatics tools

Biological databases

Programmable nucleases - including zinc-finger nucleases (ZFNs), transcription activator-like effector nucleases (TALENs) and RNA-guided engineered nucleases (RGENs) derived from the bacterial clustered regularly interspaced short palindromic repeat (CRISPR)-Cas…

Genome editing software tools and databases

Most Recent Tools

GeneOptProg
Desktop

GeneOptProg

Offers high potential for gene optimization and further researches in gene…

Offers high potential for gene optimization and further researches in gene expression. GeneOptProg is a demonstrative program and a standalone executable program that uses HEGP, DHEG, and NN to…

CRISPy
Data

CRISPy

Allows rapid identification of sgRNA target sequences in the Chinese hamster…

Allows rapid identification of sgRNA target sequences in the Chinese hamster ovary (CHO-K1) genome. The CRISPy tool identified 1,970,449 CRISPR targets divided into 27,553 genes and lists the number…

sgRNA Scorer
Desktop
Web

sgRNA Scorer

Allows users to identify single guide RNA (sgRNA) sites for any protospacer…

Allows users to identify single guide RNA (sgRNA) sites for any protospacer adjacent motif (PAM) sequence of interest. sgRNA Scorer predictions has been validated in human cells across multiple…

CGAT
Web

CGAT CRISPR Genome Analysis Tool

Identifies potential target sites for CRISPR gene editing in DNA sequences.…

Identifies potential target sites for CRISPR gene editing in DNA sequences. Then, CGAT uses the identified target sequences to search a genome of interest for potential off-target matches. CGAT…

Curators for Genome editing

  • Mikhail Zaslavskiy's avatar image
    Mikhail Zaslavskiy
    Consultant, Paris, France

By using OMICtools you acknowledge that you have read and accepted the terms of the end user license agreement.