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Genome Maps specifications


Unique identifier OMICS_06400
Name Genome Maps
Interface Web user interface
Restrictions to use None
Computer skills Basic
Stability Stable
Maintained Yes


  • Invertebrates
    • Bombyx mori
    • Caenorhabditis elegans
    • Dictyostelium discoideum
    • Drosophila melanogaster
    • Giardia intestinalis
    • Leishmania major
    • Plasmodium falciparum
  • Mammals
    • Bos taurus
  • Plants and Fungi
    • Arabidopsis thaliana
    • Aspergillus fumigatus
    • Glycine max
    • Hordeum vulgare
    • Populus trichocarpa
    • Saccharomyces cerevisiae
    • Schizosaccharomyces pombe
    • Vitis vinifera
    • Zea mays
  • Primates
    • Homo sapiens
  • Rodents
    • Mus musculus
    • Rattus norvegicus
  • Vertebrates
    • Danio rerio



  • person_outline JoaquĆ­n Dopazo <>
  • person_outline Ignacio Medina <>
  • person_outline Francisco Salavert <>

Additional information

Publication for Genome Maps

Genome Maps citation


A survey of best practices for RNA seq data analysis

PMCID: 4728800
PMID: 26813401
DOI: 10.1186/s13059-016-0881-8

[…] (read pileup), unnormalized (for example, total count) or normalized, using genome browsers such as the ucsc browser [], integrative genomics viewer (igv) [] (figure s1a in additional file ), genome maps [], or savant []. some visualization tools are specifically designed for visualizing multiple rna-seq samples, such as rnaseqviewer [], which provides flexible ways to display the read […]

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Genome Maps institution(s)
Department of Computational Genomics, Centro de Investigacion Principe Felipe (CIPF), Valencia, Spain; CIBER de Enfermedades Raras (CIBERER), Valencia, Spain; Genometra S.L., Valencia, Spain; Functional Genomics Node (INB) at CIPF, Valencia, Spain

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