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Genome-scale metabolic reconstruction software tools | Metabolic engineering data analysis

Reconstructing a metabolic network consists in drafting the list of the biochemical reactions that an organism can carry out together with information on cellular boundaries, a biomass assembly reaction, and exchange fluxes with the external environment. Building up models able to represent the different functional cellular states is universally recognized as a tricky task that requires intensive manual effort and much additional information besides genome sequence.

Source text:
(Fondi and Lio., 2014) Genome-scale metabolic network reconstruction. Methods in molecular biology.

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