GMATA specifications

Information


Unique identifier OMICS_14716
Name Genome-wide Microsatellite Analyzing Tool Package
Software type Package/Module
Interface Command line interface, Graphical user interface
Restrictions to use None
Input data DNA sequences
Input format FASTA
Output data SSR starting position, ending position, repetitions, and motif
Output format SSR, STS, GFF, GBF
Operating system Unix/Linux, Mac OS, Windows
Programming languages Java, Perl, R
Computer skills Advanced
Version 2.1
Stability Stable
Maintained Yes

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GMATA article

GMATA institution(s)
Germplasm Bank of Wild Species, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, China; Key Laboratory of Forensic Genetics and Beijing Engineering Research Center of Crime Scene Evidence Examination, Institute of Forensic Science, Ministry of Public Security, Beijing, China

GMATA review

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Xuewen Wang

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Desktop
Great news. I am glad to find that the software GMATA is on Omicstool now. I just notice this page.
Hope this will contribute to the research and application in the field of DNA sequence to molecular markers. This is a better software than existing tools.
I will be glad to answer any question from you here.
Xuewen Wang

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