Contains a gene loci browser with nucleotide level mappings of oligo probes from expression microarrays. GATExplorer enables interactive exploration of gene loci, transcripts and exons of human, mouse and rat genomes. It allows vision of probes in their own genomic context, with associated non-coding or protein-coding transcripts. In order to analyze transcriptomic data in a genomic context, five major datasets are integrated to this database.
Bioinformatics and Functional Genomics Research Group, Cancer Research Center (CiC-IBMCC, CSIC/USAL), Salamanca, Spain; Institute for Molecular Bioscience, University of Queensland, Brisbane, Australia
GATExplorer funding source(s)
Supported by the spanish Ministry of Science and Innovation MICINN (ISCiii, ref. projects PI061153 and PS09/00843) and the local government Junta de Castilla y León (ref. projects CSI03A06 and CSI07A09).