Genome variation analysis software tools and databases

Genome variant analysis steps

Bioinformatics tools

Biological databases

Genome variation analysis software tools and databases

Most Recent Tools

CMIF
Desktop

CMIF Causal Model Inference Framework

Formalizes causal relationships between somatic genomic events, signaling…

Formalizes causal relationships between somatic genomic events, signaling pathway activity and immune activity in the tumor. CMIF infers directed interactions between signaling pathway activity and…

HGVA
Dataset

HGVA Human Genome Variation Archive

Allows to access to key and high-quality reference project data. HGVA is a…

Allows to access to key and high-quality reference project data. HGVA is a genetic variation resource which contains variants from key world-wide reference projects and added-value information as…

DoCM
Dataset

DoCM Database of Curated Mutations in Cancer

Enables to aggregate, store, and track biologically important cancer variants…

Enables to aggregate, store, and track biologically important cancer variants for the cancer research community. DoCM is an open resource that provides an easy access to a current and accurate list…

OUGene
Dataset

OUGene disease-associated Over- and Under-expressed Gene database

Provides the association information between gene over- or under-expression and…

Provides the association information between gene over- or under-expression and diseases. OUGene offers 41,269 unique associations between 7,238 over- or under-expressed genes and 1,480 diseases. It…

Most Popular Tools

A A A
RBP-Var
Dataset

RBP-Var

Provides annotation of functional variants involved in post-transcriptional…

Provides annotation of functional variants involved in post-transcriptional interaction and regulation. RBP-Var provides a user-friendly web interface, allowing users to rapidly find whether SNVs of…

VarSome
Dataset

VarSome

A knowledge base and aggregator for human genomic variants. VarSome gives fast…

A knowledge base and aggregator for human genomic variants. VarSome gives fast access to more than 17 billion items of variant and gene annotation sourced from public databases. It also provides…

IGV
Desktop

IGV Integrative Genomics Viewer

A high-performance viewer that efficiently handles large heterogeneous data…

A high-performance viewer that efficiently handles large heterogeneous data sets, while providing a smooth and intuitive user experience at all levels of genome resolution. A key characteristic of…

is-rSNP
Web

is-rSNP In silico regulatory SNP detection

Predicts whether a SNP is an rSNP. For a given SNP, and using a statistical…

Predicts whether a SNP is an rSNP. For a given SNP, and using a statistical framework, is-rSNP can successfully predict the set of TFs for which binding is affected. It provides the statistical power…

Information

By using OMICtools you acknowledge that you have read and accepted the terms of the end user license agreement.