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Genome and epigenome software tools and databases

Genomics is an interdisciplinary field of molecular biology focusing on the DNA content of living organisms. High-throughput sequencing technologies and bioinformatics have transformed genome analysis by mapping and decrypting coding and non-coding…

Genomics & Epigenomics applications

Experts in Genomics & Epigenomics

They share and annotate bioinformatics tools

Most recent bioinformatics tools

QPDDD
Algorithm
codaln
Desktop

codaln

Allows users to create multiple nucleic acid alignments. codaln is a standalone…

Allows users to create multiple nucleic acid alignments. codaln is a standalone software, based on Gotoh's algorithm, that supplies an extended scoring scheme for considering information on…

inPHAP
Desktop

inPHAP Interactive Phased Haplotype Visualization

Provides an interface for visualizing unphased genotypes and phased haplotypes.…

Provides an interface for visualizing unphased genotypes and phased haplotypes. inPHAP is an interactive application allowing users to investigate patterns in large genetic datasets and to study…

YGD
Dataset

YGD The Yak Genome Database

Gathers genome data about genes and proteins of Bos grunniens. YGD is a…

Gathers genome data about genes and proteins of Bos grunniens. YGD is a repository that compiles predicted functional information and genomic sequence including more than 22000 protein-coding genes.…

Most popular analytical software and databases

ZENBU
Web

ZENBU

Enables data exploration through "on-demand" data processing and…

Enables data exploration through "on-demand" data processing and interactive linked-visualizationsthus enabling concurrent views from the same mere primary sequence alignment data which…

MiRPara
Desktop

MiRPara

A SVM-based software tool for prediction of most probable microRNA coding…

A SVM-based software tool for prediction of most probable microRNA coding regions in genome scale sequences. miRPara is an effective tool for locating miRNAs coding regions in genome sequences and…

JASPAR
Dataset

JASPAR

An open-access database storing curated, non-redundant transcription factor…

An open-access database storing curated, non-redundant transcription factor (TF) binding profiles representing transcription factor binding preferences as position frequency matrices for multiple…

Circos
Desktop

Circos

Displays large volumes of genomic rearrangement data. Circos is a visualization…

Displays large volumes of genomic rearrangement data. Circos is a visualization tool that applies a circular ideogram layout to display relationships between genomic intervals. The software provides…

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