Genome analysis software tools and databases

Genomics applications

Genome analysis software tools and databases

Most Recent Tools

PhagesDB PhagesDB

PhagesDB

Collects and shares data, pictures, protocols, and analysis tools associated…

Collects and shares data, pictures, protocols, and analysis tools associated with the discovery, sequencing, and characterization of mycobacteriophages viruses that infect the Mycobacteria. PhagesDB…

Web app
Green Listed Green Listed

Green Listed

Designs custom Clustered Regularly Interspaced Short Palindromic Repeats…

Designs custom Clustered Regularly Interspaced Short Palindromic Repeats (CRISPR) screens targeting sets of genes defined by the user. Green Listed is a web-based tool facilitating the rapid design…

Desktop app
ScalaBlast ScalaBlast

ScalaBlast

Parallelizes the BLAST calculations by dynamically scheduling them across…

Parallelizes the BLAST calculations by dynamically scheduling them across processors using a fault-resilient scheme. ScalaBLAST is designed to run a large number of queries against either large or…

AtGDB AtGDB

AtGDB

Includes extensive tools for visualization and further analysis. AtGDB is a…

Includes extensive tools for visualization and further analysis. AtGDB is a relational database with an elaborate Web interface designed to allow users to browse the genome and query by sequence…

Most Popular Tools

Web app
ZENBU ZENBU

ZENBU

Enables data exploration through "on-demand" data processing and…

Enables data exploration through "on-demand" data processing and interactive linked-visualizationsthus enabling concurrent views from the same mere primary sequence alignment data which…

Desktop app
MiRPara MiRPara

MiRPara

A SVM-based software tool for prediction of most probable microRNA coding…

A SVM-based software tool for prediction of most probable microRNA coding regions in genome scale sequences. miRPara is an effective tool for locating miRNAs coding regions in genome sequences and…

EuMicrobedbLite EuMicrobedbLite

EuMicrobedbLite

A light weight comprehensive genome resource and sequence analysis platform for…

A light weight comprehensive genome resource and sequence analysis platform for oomycete organisms. EuMicrobedbLite is a successor of the VBI Microbial Database (VMD) that was built using the Genome…

Web app
GeneTalk GeneTalk

GeneTalk

A web-based tool, knowledgebase and community for analysis and interpretation…

A web-based tool, knowledgebase and community for analysis and interpretation of human variant files. GeneTalk provides an intuitive web-based interface for geneticists that analyze human sequence…

Curators for Genomics

  • Shailesh Kumar's avatar image Shailesh Kumar's country flag
    Shailesh Kumar
    Department of Pathology,…
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