Genomon ITDetector statistics

To access cutting-edge analytics on consensus tools, life science contexts and associated fields, you will need to subscribe to our premium service.

Subscribe
info

Citations per year

Citations chart
info

Popular tool citations

chevron_left CNV detection Internal tandem duplication detection chevron_right
Popular tools chart
info

Tool usage distribution map

Tool usage distribution map
info

Associated diseases

Associated diseases

Genomon ITDetector specifications

Information


Unique identifier OMICS_05530
Name Genomon ITDetector
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Programming languages Perl, Shell (Bash)
Computer skills Advanced
Stability Stable
Requirements
BLAT, bedtools, CAP, fasta, SAMtools, UCSC site: refGene.txt, knownGene.txt, ensGene.txt, simpleRepeat.txt
Maintained Yes

Download


Versioning


Add your version

Documentation


Maintainers


  • person_outline Kenichi Chiba <>
  • person_outline Yuichi Shiraishi <>

Publication for Genomon ITDetector

Genomon ITDetector in publication

PMCID: 4972641
PMID: 27063598
DOI: 10.1038/leu.2016.69

[…] mutations and small insertions/deletions were validated in our frequency cohort. in addition, the presence of flt3-itd (fms-like tyrosine kinase 3-internal tandem duplication) was examined using the genomon itdetector and verified using pcr analysis., our collective analysis of discovery and frequency cohorts revealed flt3 as most frequently altered gene in primary apl (), similar to observation […]


To access a full list of publications, you will need to upgrade to our premium service.

Genomon ITDetector institution(s)
Laboratory of DNA Information Analysis, Human Genome Center, the Institute of Medical Science, The University of Tokyo, Tokyo, Japan; Department of Pathology and Tumor Biology, Graduate School of Medicine, Kyoto University, Kyoto, Japan

Genomon ITDetector reviews

star_border star_border star_border star_border star_border
star star star star star

Be the first to review Genomon ITDetector