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GenoREAD | Sequence verification of synthetic DNA by assembly of sequencing reads

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A web-based application that breaks the sequence verification process into two steps: the assembly of sequencing reads and the alignment of the resulting contig with a reference sequence. GenoREAD can determine if a clone matches its reference sequence. Its sophisticated reporting features help identify and troubleshoot problems that arise during the sequence verification process. GenoREAD has been experimentally validated on thousands of gene-sized constructs from an ORFeome project, and on longer sequences including whole plasmids and synthetic chromosomes.

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GenoREAD classification

GenoREAD specifications

Unique identifier:
OMICS_01823
Restrictions to use:
None
Computer skills:
Basic
Maintained:
Yes
Interface:
Web user interface
Programming languages:
Javascript, Perl, PHP
Stability:
Stable

GenoREAD support

Maintainer

  • Jean Peccoud <>

Credits

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Publications

Institution(s)

Virginia Bioinformatics Institute, Virginia Tech, Blacksburg, VA, USA

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