GenoTan specifications

Information


Unique identifier OMICS_00105
Name GenoTan
Software type Package/Module
Interface Command line interface
Restrictions to use None
Input data A microsatellite list file (which requires '-m') and a file containing mapped reads.
Input format SAM,BAM
Output format TSV
Operating system Unix/Linux
Programming languages C
License GNU General Public License version 3.0
Computer skills Advanced
Version 0.15
Stability Stable
Maintained Yes

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Maintainer


  • person_outline Harold Garner <>

Publication for GenoTan

GenoTan institution(s)
Virginia Bioinformatics Institute, Virginia Tech, Blacksburg, VA and Office of Biostatistics Research, National Heart, Lung and Blood Institute, National Institutes of Health, Bethesda, MD, USA
GenoTan funding source(s)
Supported by the Medical Informatics and Systems Division director’s funds; the National Human Genome Research Institute (of the National Institute of Health) [The 1000 Genomes Project Dataset Analysis Grant; grant numbers U01 HG005719-01, U01HG005719-02].

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