GenPlay pipeline

GenPlay specifications

Information


Unique identifier OMICS_08292
Name GenPlay
Software type Package/Module
Interface Graphical user interface
Restrictions to use None
Operating system Unix/Linux, Mac OS, Windows
Programming languages Java
License GNU General Public License version 3.0
Computer skills Medium
Stability Stable
Maintained Yes

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Documentation


Maintainers


  • person_outline Julien Lajugie <>
  • person_outline Eric Bouhassira <>

Publications for GenPlay

GenPlay citation

2013
PMCID: 3669306

[…] higher than normal read-depth in all quartet members. (more refined analysis was performed subsequently to identify cnvs). the filter was created using cnvnator and the island finder algorithm of genplay. about 18.8 * 10e6 bases, that is 0.66% of the genome (assuming a genome size of 2.86*10e9 non n bases) is covered by this filter., variant recalibration was performed following the best […]

GenPlay institution(s)
Department of Cell Biology, Albert Einstein College of Medicine, New York, NY, USA
GenPlay funding source(s)
Grants C024405 and C024172 from NYSTEM

GenPlay review

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Eric

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Desktop
Great software

Similar to IGV but much faster and a lot more functions