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Geometrical core specifications


Unique identifier OMICS_24843
Name Geometrical core
Alternative name Gcore
Interface Web user interface
Restrictions to use None
Input data An alignment.
Computer skills Basic
Stability Stable
Maintained Yes


  • person_outline Sergey Spirin <>

Geometrical core citations


Diversity of nonribosomal peptide synthetase and polyketide synthase gene clusters among taxonomically close Streptomyces strains

PMCID: 5932044
PMID: 29720592
DOI: 10.1038/s41598-018-24921-y

[…] & cngdhacadhbnva in s. diastaticus subsp. ardesiacus tp-a0882, dhadggcgdhadhbcgnacidhadhagdha, inldhbddgcgdhadhbcdhadhapcadhbnva & ckgdhacadhbnva in s. coelicoflavus nbrc 15399t; gcore peptide amino acid sequence predicted by antismash; hbased on the similarity to bgcs for giosmin., awhen the outputs of antismash showed >40% gene similarities, we putatively considered […]


Enhanced Interface Structure and Properties of Titanium Carbonitride Based Cermets with the Extra Solid Phase Reaction

PMCID: 5615744
PMID: 28914796
DOI: 10.3390/ma10091090

[…] of ti(c,n)/(ti, w, ta, mo)(c,n) core/rim structure and the plastic rupture of (co,ni). the combined effects of the core/rim structure and co/ni binder can be described by:gcermet = (1 − vbinder)gcore-rim + vbinderσodbinderχ(1) where gcore-rim is the strain energy release rate of the core-rim structure, σo is the bulk flow stress of the binder, and χ is the function of bond strength […]


Performance of algorithms that reconstruct missing transverse momentum in \documentclass[12pt]{minimal} \usepackage{amsmath} \usepackage{wasysym} \usepackage{amsfonts} \usepackage{amssymb} \usepackage{amsbsy} \usepackage{mathrsfs} \usepackage{upgreek} \setlength{\oddsidemargin}{ 69pt} \begin{document}$$\sqrt{s}$$\end{document}s= 8 TeV proton–proton collisions in the ATLAS detector

PMCID: 5409168
PMID: 28515666
DOI: 10.1140/epjc/s10052-017-4780-2

[…] + g_\mathrm{{base}}(\eta ) &{} \left( |\eta |~\ge ~\eta _\mathrm {plateau}\right) \end{array} \right. \end{aligned}$$\end{document}pfctρ(η,npv,⟨μ⟩)=1(|η|<ηplateau)(1-gbase(ηplateau))·gcore(|η|-ηplateau)+gbase(η)|η|≥ηplateau where the central region \documentclass[12pt]{minimal} \usepackage{amsmath} \usepackage{wasysym} \usepackage{amsfonts} \usepackage{amssymb} […]


Individually Stabilized, Superparamagnetic Nanoparticles with Controlled Shell and Size Leading to Exceptional Stealth Properties and High Relaxivities

PMCID: 5290491
PMID: 28071883
DOI: 10.1021/acsami.6b12932

[…] as the potentially larger systematic measurement error of small particles due to lower contrast and resolution limitation. it is also possible that the magnetic core size strongly deviates from the geometrical core size used to plot b, as shown by luigjes et al. they concluded that crystal defects play a larger role to determine the nanoparticle magnetic properties than the size. highly […]


Fluorescence microscopy reveals molecular localisation at line defects in nematic liquid crystals

PMCID: 5095605
PMID: 27812045
DOI: 10.1038/srep36477

[…] the total free energy of the system is given by , and the distribution of ϕguest is determined by, , where μ is the chemical potential independent of r. we denote g(r) at the defect core by gcore and that in the bulk by gbulk. then, yields, , where we have dropped terms second order or higher in ϕguest because in our experiments ϕguest ≪ 1 (at most 10−3). we will show later […]


Task Based Core Periphery Organization of Human Brain Dynamics

PMCID: 3784512
PMID: 24086116
DOI: 10.1371/journal.pcbi.1003171

[…] role such core regions might play in individual network layers of the multilayer network . while the roles of nodes in a static network can be studied in multiple ways , , we focus on describing the geometrical core-periphery organization— which can be used to help characterize the organization of edge strengths throughout a network —to compare it with the temporal core-periphery organization […]

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Geometrical core institution(s)
Belozersky Institute of PhysicoChemical Biology, Lomonosov Moscow State University, Moscow, Russia
Geometrical core funding source(s)
Supported, in part, by the Russian Foundation for Basic Research, grants 09–04–92743, 09–04–10-07-00685.

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