GeoPCA specifications


Unique identifier OMICS_10164
Name GeoPCA
Interface Web user interface
Restrictions to use None
Computer skills Basic
Stability Stable
Maintained Yes


  • person_outline Carmay Lim <>

Publication for GeoPCA

GeoPCA in publication

PMCID: 4651507
PMID: 26579714
DOI: 10.1371/journal.pone.0143065

[…] using different modules of ambertools 1.5 []. the cpptraj and mmgbsa module of ambertools 1.5 was used to calculate hydrogen bonding and free energy parameters for the simulations. a tool named geopca, was used to perform dihedral pca []. pca is a multivariate statistical technique which represents a set of correlated variables as orthogonal principal components. these principal components […]

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GeoPCA institution(s)
Institute of Biomedical Sciences, Academia Sinica, Taipei, Taiwan

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