Gerbil specifications
- Unique identifier:
- OMICS_17403
- Software type:
- Package/Module
- Restrictions to use:
- None
- Input format:
- FASTQ, FASTA, STADEN
- Programming languages:
- C++
- Computer skills:
- Advanced
- Maintained:
- Yes
- Name:
- Gerbil
- Interface:
- Command line interface
- Input data:
- A genome read.
- Operating system:
- Unix/Linux, Windows
- License:
- MIT License
- Stability:
- Stable
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Gerbil distribution
download
Gerbil support
Maintainer
- Steffen Rechner <>
forum
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Publications
-
(Erbert et al., 2017)
Gerbil: a fast and memory-efficient k-mer counter with GPU-support.
Algo Mol Biol.
PMID: 28373894
Institution(s)
Institute of Computer Science, Martin Luther University Halle-Wittenberg, Halle, Germany
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