Analyzes mixtures of native N glycopeptides that have been profiled by tandem mass spectrometry. gFinder provides features to identify successfully glycopeptides present in not only standard glycoproteins (e.g., IgG and vitronectin) but also in clinical samples (HCC patients’ plasma). It not only enables the simultaneous integration of collision-induced dissociation (CID) and high energy collisional dissociation (HCD) fragmentation, but also merges each spectrum for high-throughput analysis.
Graduate Program in Functional Genomics, College of Life Sciences and Biotechnology, Yonsei University, Seoul, Korea; Yonsei Proteome Research Center, Seoul, Korea; Korea Basic Science Institute, Ochang, Chungbuk, Korea
gFinder funding source(s)
This work was supported by a grant from the Korean Ministry of Health and Welfare (HI13C2098 International Consortium Project; HI16C0257).