GIDetector statistics

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Citations per year

Number of citations per year for the bioinformatics software tool GIDetector

Tool usage distribution map

This map represents all the scientific publications referring to GIDetector per scientific context
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Associated diseases


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GIDetector specifications


Unique identifier OMICS_08285
Name GIDetector
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Windows
Programming languages C#
Computer skills Advanced
Stability Stable
Maintained Yes


No version available


  • person_outline Dongsheng Che

Publication for GIDetector

GIDetector citations


Computational methods for predicting genomic islands in microbial genomes

Comput Struct Biotechnol J
PMCID: 4887561
PMID: 27293536
DOI: 10.1016/j.csbj.2016.05.001
call_split See protocol

[…] e refined via incorporating more precise annotations available now .Several machine learning approaches based on constructed GI datasets have been proposed, including Relevance Vector Machine (RVM) , GIDetector , and GIHunter . The major differences among them are in the choices of training datasets, GI-related features, and learning algorithms.RVM is the first machine learning method to study str […]


A Computational Framework for Tracing the Origins of Genomic Islands in Prokaryotes

PMCID: 4897231
PMID: 27433520
DOI: 10.1155/2014/732857

[…] content, dinucleotide biases, codon usage, mobility genes (including transposases and integrases), and tRNA genes [, ]. Related tools using this kind of approach include AlienHunter [], Centroid [], GIDetector [], GIHunter [], PAI IDA [], and SIGI-HMM []. Comparative genome approach uses the phylogenetically close species as reference genomes and identifies subsequences that are unique in the que […]

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GIDetector institution(s)
Department of Computer Science, East Stroudsburg University, East Stroudsburg, PA, USA

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