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glfMultiples

Detects nucleotide polymorphism. glfMultiples is a variant caller for next-generation sequencing data (NGS). The software considers, for each possible position, a series of potential polymorphisms that include transitions and transversions from the reference base and bi-allelic polymorphisms where neither of the alleles present in the sample is the reference base. Detection of polymorphic sites takes into account the maximized likelihood but also an overall prior for each type of polymorphism.

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glfMultiples classification

glfMultiples specifications

Software type:
Application/Script, Package/Module
Restrictions to use:
None
Output data:
Variant calls.
Operating system:
Unix/Linux
Stability:
Stable
Interface:
Command line interface
Input format:
GLF
Output format:
VCF
Computer skills:
Advanced
Maintained:
Yes

glfMultiples distribution

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