GlycanMass specifications

Information


Unique identifier OMICS_15174
Name GlycanMass
Interface Web user interface
Restrictions to use None
Computer skills Basic
Stability Stable
Maintained Yes

Documentation


GlycanMass in publications

 (3)
PMCID: 5498624
PMID: 28585084
DOI: 10.1007/s00216-017-0406-7

[…] peptides of known protein amino acid sequences or proteins on uniprot databases, which have the potential to be glycosylated with either n- or o-linked glycans, and generate glycan compositions. glycanmass [] is another web-based program which calculates the mass of a glycan structure from its oligosaccharide composition., commercial software such as byonic and simglycan are powerful tools […]

PMCID: 4215848
PMID: 24941220
DOI: 10.1021/ac500876p

[…] liquid chromatography (hilic) and analyzed by the same algorithm to evaluate the false discovery rate (fdr). glycan stuctures reported previously, and expasy tools glycomod, peptidemass, and glycanmass were used to identify glycan compositions and glycan types., ms analysis infers the glycan compositions rather than actual glycan structures, hence the glycan structures reported […]

PMCID: 3133923
PMID: 21629267
DOI: 10.1038/ncomms1333

[…] glycopeptides and treated with pngasef to release n-glycans. n-glycans were desialylated by mild acid digestion before permethylation and mass spectroscopy. monoisotopic peaks were identified using glycanmass/glycomod software., computational modelling of golgi n-glycan processing and lattice-mediated glycoprotein surface retention was previously described. briefly, biochemical reaction network […]


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