GlyTorsion statistics

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GlyTorsion specifications

Information


Unique identifier OMICS_21257
Name GlyTorsion
Interface Web user interface
Restrictions to use None
Computer skills Basic
Stability Stable
Maintained Yes

Maintainer


  • person_outline Claus-W von der Lieth

Publications for GlyTorsion

GlyTorsion citations

 (3)
library_books

Bioinformatics and molecular modeling in glycobiology

2010
PMCID: 2912727
PMID: 20364395
DOI: 10.1007/s00018-010-0352-4

[…] search for carbohydrate structures in the PDB.Fig. 8Statistical analysis of structural parameters of the carbohydrates present in the PDB entries can be performed with the tools GlySeq, GlyVicinity, GlyTorsion, and carp (http://www.glycosciences.de/tools) []. GlySeq checks the type of amino acids that are in the sequence neighborhood of N- and O-glycosylation sites, GlyVicinity performs an analys […]

library_books

Analysis and validation of carbohydrate three dimensional structures

2009
PMCID: 2631634
PMID: 19171971
DOI: 10.1107/S0907444909001905

[…] rp/; Lütteke et al., 2005). To judge the quality of the observed torsions, comparison data are needed. These can be retrieved from the carbohydrate torsions that are present in the PDB as provided by glyTorsion (http://www.glycosciences.de/tools/glytorsion/) or from computationally generated maps retrieved from the GlycoMapsDB (http://www.glycosciences.de/modeling/glycomapsdb/; Frank et al., 2007) […]

library_books

Structural glycobiology: A game of snakes and ladders

2008
Glycobiology
PMCID: 4203483
PMID: 18390826
DOI: 10.1093/glycob/cwn026

[…] y glycans in a solution. Until recently, these types of statistical analyses were challenging to perform due to limited search software; however, a particularly convenient interface for this purpose (GlyTorsion) has been developed (). Exceptions to the tendency to bind low energy conformations are found in carbohydrate-processing enzymes, in which ligand distortion in the active site may be integr […]

Citations

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GlyTorsion institution(s)
Central Spectroscopic Department, German Cancer Research Centre, Heidelberg, Germany; Institute for Glycomics, Griffith University (Gold Coast Campus), QLD, Australia
GlyTorsion funding source(s)
Supported by a grant from the German Research Council (Deutsche Forschungsgemeinschaft, DFG) within the digital library program.

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