GMTV specifications

Information


Unique identifier OMICS_21871
Name GMTV
Alternative name Genome-wide Mycobacterium tuberculosis variation
Restrictions to use None
Community driven No
Data access File download, Browse
User data submission Allowed
Maintained Yes

Taxon


  • Bacteria
    • Mycobacterium tuberculosis

Maintainers


  • person_outline Ekaterina Chernyaeva
  • person_outline Stephen O’Brien

Publication for Genome-wide Mycobacterium tuberculosis variation

GMTV citations

 (2)
library_books

A Nonsynonymous SNP Catalog of Mycobacterium tuberculosis Virulence Genes and Its Use for Detecting New Potentially Virulent Sublineages

2017
Genome Biol Evol
PMCID: 5381574
PMID: 28338924
DOI: 10.1093/gbe/evx053

[…] here was estimated from epidemiologic studies and is slightly higher than the substitution rate obtained from ancient DNA analysis (). Fig. 4.—Further search for B0/N-90 members was conducted in the GMTV database that stores 140 Beijing-B0/W-148 genomes (most of them isolated in Russia). Twenty-two new Russian isolates of B0/N-90 sublineage were detected, most of them isolated in Samara Oblast, R […]

library_books

Whole genome sequencing targets drug resistant bacterial infections

2015
Hum Genomics
PMCID: 4525730
PMID: 26243131
DOI: 10.1186/s40246-015-0037-z

[…] the bacteria within a single patient [].In summary, together with developed tools for WGS data analysis (e.g., Rainbow []) and unifying genome-wide database (e.g., M. tuberculosis Variation Database (GMTV) [], The Bacterial Isolate Genome Sequence Database (BIGSdb) []) containing the broad spectrum information about individual mutations of pathogens, WGS can be a powerful tool for the preliminary […]

GMTV institution(s)
St. Petersburg State University, Theodosius Dobzhansky Center for Genome Bioinformatics, St. Petersburg, Russia; St. Petersburg Institute of Phthisiopulmonology, St. Petersburg, Russia; Research Institute of Physical-Chemical Medicine, Moscow, Russia; Moscow Institute of Physics and Technology, Dolgoprudny, Russia; Moscow Scientific-Practical Center of Treatment of Tuberculosis of Moscow Healthcare, Moscow, Russia; St. Petersburg Pasteur Institute, St. Petersburg, Russia; St. Petersburg Academic University, St. Petersburg, Russia
GMTV funding source(s)
Supported in part by the Russian Ministry of Education and Science, Mega-grant no. 11.G34.31.0068 and grant no. 16.522.11.2003.

GMTV reviews

star_border star_border star_border star_border star_border
star star star star star

Be the first to review GMTV