GObar statistics

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Citations per year

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Popular tool citations

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Tool usage distribution map

Tool usage distribution map
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Associated diseases

Associated diseases

GObar specifications

Information


Unique identifier OMICS_18898
Name GObar
Interface Web user interface
Restrictions to use None
Computer skills Basic
Stability No
Maintained No

Taxon


  • Invertebrates
    • Drosophila melanogaster
  • Plants and Fungi
    • Saccharomyces cerevisiae
  • Primates
    • Homo sapiens
  • Rodents
    • Mus musculus

Maintainers


This tool is not available anymore.

Publication for GObar

GObar in publications

 (3)
PMCID: 4588572
PMID: 26420475
DOI: 10.1038/srep14139

[…] ). compared to arabidopsis, each cotton genome or subgenome contains more genes in the cesa3, cesa4, cesa7 and cesa8 clades. notably, chromosome 5 of both the at and dt subgenomes of g. barbadense (gobar_aa25282, gobar_aa25287/gobar_dd32643, gobar_dd32648 and gobar_dd32650) and g. hirsutum (gh_a05g3959, gh_a05g3965, gh_a05g3967/gh_d05g0077, gh_d05g0079 and gh_d05g0084) as well as g. arboreum […]

PMCID: 1885641
PMID: 17403693
DOI: 10.1093/nar/gkm054

[…] the hypergeometric distribution., other tools use the hypergeometrical distribution or equivalent fisher's exact test for finding overrepresented concepts from gene ontology, including fatigo (22), gobar (23), gominer (24), gotoolbox (25), genemerge (26), gotree machine (27), ontologytraverser (28), gocluster (29) and gohypergall in r bioconductor (30)., in blastsets, barriot et al. use […]

PMCID: 1557818
PMID: 16914448
DOI: 10.1093/nar/gkl556

[…] sites and their flanking sequences. each tool results in the selection of a subset of splice sites. the genes containing these splice sites can be analysed for functional and other biases by using gobar (), which is provided as a built-in tool., this tool allows users to retrieve splice site flanking sequences by specifying one or more splice-site subtypes, cut-off 5′ss or 3′ss scores, […]


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GObar institution(s)
Cold Spring Harbor Laboratory, Cold Spring Harbor, NY, USA
GObar funding source(s)
Supported by the Cancer Center of CSHL.

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