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GOblet | Annotation of anonymous sequence data with gene ontology and pathway terms

Allows gene and genome annotations. GOblet integrates views delivered by ontologies and metabolic or signaling pathways. It can take into account system-level interactions of cellular components. This tool was used for the detection and integrative study of novel genes specifically expressed and developmentally regulated in murine spermatogenic cells. It is useful for high-throughput processing on user’s local machines.

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GOblet classification

GOblet specifications

Unique identifier:
OMICS_02271
Restrictions to use:
None
Input format:
FASTA
Stability:
Stable
Interface:
Web user interface
Input data:
Some query sequences.
Computer skills:
Basic
Maintained:
Yes

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GOblet classification

GOblet specifications

Unique identifier:
OMICS_02271
Interface:
Command line interface
Input data:
Some query sequences.
Operating system:
Unix/Linux, Mac OS, Windows
License:
GNU General Public License version 3.0
Stability:
Stable
Maintained:
Yes
Software type:
Application/Script
Restrictions to use:
None
Input format:
FASTA
Programming languages:
C
Computer skills:
Advanced
Source code URL:
http://goblet.molgen.mpg.de/goblet.zip

GOblet distribution

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GOblet support

Documentation

Maintainers

  • Detlef Groth <>
  • Steffen Hennig <>
  • Detlef Groth <>
  • Steffen Hennig <>

Additional information

http://goblet.molgen.mpg.de/cgi-bin/goblet2008/goblet.cgi?menu=Help

Credits

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Publications

Institution(s)

Potsdam University, Bioinformatics Group, c/o Max Planck Insitute of Molecular Plant Physiology, Potsdam-Golm, Germany; Max Planck Institute for Molecular Genetics, Berlin, Germany; ImaGenes GmbH, Berlin, Germany

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