GoGene specifications

Information


Unique identifier OMICS_16314
Name GoGene
Interface Web user interface
Restrictions to use None
Computer skills Basic
Stability No
Maintained No

Maintainer


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Publication for GoGene

GoGene in publications

 (9)
PMCID: 5960261
DOI: 10.7717/peerj.4704

[…] receptor activity, and kinase activity (), whereas the down-regulated degs were mainly enriched in calcium ion binding, heparin binding, and protein tyrosine phosphatase activity ()., notes. , gogene ontology bpbiological process mfmolecular function cccellular component , gene ontology, biological process, molecular function, cellular component, p-value < 0.05 was considred […]

PMCID: 4774952
PMID: 26933947
DOI: 10.1371/journal.pone.0150222

[…] putative targets, only genes with previously reported functions in the pathology of hirschsprung’s disease were considered to represent true targets of mirnas differentially expressed in hscr. the gogene (http://gopubmed.org/gogene) [] and ncbi pubmed databases (http://www.ncbi.nlm.nih.gov/pubmed/) were used for literature retrieval., functional analyses were performed using the david software […]

PMCID: 4746901
PMID: 26862397
DOI: 10.1186/s40104-016-0064-1

[…] expressed genes as follows. we constructed a synthesized gene set containing genes related to muscle mass regulation based on gene ontology (go) annotation and literature mining. pubgene [] and gogene [] are literature mining tools that can retrieve genes involved in skeletal muscle growth in our data. database for annotation, visualization and integrated discovery software [] was used […]

PMCID: 4217173
PMID: 25374775
DOI: 10.7717/peerj.618

[…] yet in hesc, such as the transcription factor 3 (tcf3) (). however, for the majority of candidates, including titin, nothing is known yet about their functions in the context of hescs., notes. , gogene onlotogykeggkyoto encyclopedia of genes and genomesccommon partsspecific partecextracellular parttftranscription factor related partjcell junction , gene onlotogy, kyoto encyclopedia of genes […]

PMCID: 3489671
PMID: 23139788
DOI: 10.1371/journal.pone.0048527

[…] list (), we used a manually curated list that has been maintained over the past years, covering 189 genes. we extended this list by carrying out a search for genes related to “adult neurogenesis” at gogene. key publications describing the role of each gene in adult neurogenesis were used as the basis of the database. in addition to this initial survey, an automated search has been established […]


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GoGene institution(s)
Biotechnology Center, Technische Universität Dresden, Dresden, Germany; Department of Computer Science and Engineering, Arizona State University, Tempe, AZ, USA
GoGene funding source(s)
This work was supported by the EU project SEALIFE and the BMBF project ForMaT.

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