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|Alternative names||Gs2, Goldsurfer2|
|Interface||Graphical user interface|
|Restrictions to use||None|
|Operating system||Unix/Linux, Mac OS, Windows|
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Publications for Goldsurfer
Modeling associations between genetic markers using Bayesian networks
[…] ficient (Liu and Lin, ). This active search of LD coefficients has been accompanied with the development of various tools that display LD measures in a comprehensive way. Examples of those tools are: GOLDsurfer (Pettersson et al., ), Haploview (Barrett et al., ) and LdCompare (Hao et al., ). This remarkable interest in developing new measures and tools for studying LD can be explained by the drama […]
Cubic exact solutions for the estimation of pairwise haplotype frequencies: implications for linkage disequilibrium analyses and a web tool 'CubeX'
[…] haplotype frequencies , and of other EM algorithms that enable the estimation of multilocus haplotype frequencies. Many programs exist that utilise variations on this approach, including: GOLD , GOLDsurfer , MIDAS , Haploview  and many others reviewed in [-]. The potential problem for these approaches is that algorithms may converge on one of the alternative roots of the cubic equation […]
MIDAS: software for analysis and visualisation of interallelic disequilibrium between multiallelic markers
[…] ts and statistical tests), and many programs exist for that purpose (including Haploview, 2LD, Arlequin, GDA, DNAsp, ALLASS, DISEQ, DMAP, etc., reviewed in  and ). Some software, such as GOLD , GOLDsurfer  and Haploview , also include graphical displays enabling quick overviews of large regions. However, most packages are intended for use with single-nucleotide polymorphism (SNP) data in […]
Genetic Analysis of Completely Sequenced Disease Associated MHC Haplotypes Identifies Shuffling of Segments in Recent Human History
[…] stimates of pairwise-disequilibrium coefficient—D′ —between SNPs were obtained employing the ldmax program in the GOLD package . Long-range LD patterns—high LD and LD breaks—were visualised using GOLDsurfer program . Detailed haplotype-block structure according to Gabriel et al. (2002)  criteria was also derived  in order to cross-validate interpretations of the LD landscape in the regio […]
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