GOModeler specifications


Unique identifier OMICS_22587
Name GOModeler
Interface Web user interface
Restrictions to use None
Input data A Gene Expression File containing identifiers and gene expression values; and (a Hypothesis File containing the hypothesis terms of interest OR a Hypothesis GO Term File containing the hypothesis terms AND associated GO Terms.
Input format TXT
Output data The results, a job identifier, and a link to the edit interface.
Programming languages Perl
Computer skills Basic
Stability No
Maintained No


This tool is not available anymore.

Additional information

http://agbase.msstate.edu/help/gomodelerhelp.htm http://www.agbase.msstate.edu/Education/NABDAWorkshop/tutorial_6/GOModeler_Tutorial.htm

Publication for GOModeler

GOModeler institution(s)
Department of Computer Science and Engineering, Mississippi State University, MS, USA; Institute of Digital Biology, Mississippi State University, MS, USA; Life Sciences and Biotechnology Institute, Mississippi State University, MS, USA; College of Veterinary Medicine, Mississippi State University, MS, USA
GOModeler funding source(s)
Supported by National Research Initiative of the USDA Cooperative State Research, Education and Extension Service under grant number 2007-35205-17941 and by the National Science Foundation under grant number EPS 0903787.

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