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GoPubMed | Exploring PubMed with the Gene Ontology

Obsolete

Allows users to explore PubMed search results with the Gene Ontology (GO), a hierarchically structured vocabulary for molecular biology. GoPubMed provides the following benefits: first, it gives an overview of the literature abstracts by categorizing abstracts according to the GO and thus allowing users to quickly navigate through the abstracts by category. Second, GoPubMed automatically shows general ontology terms related to the original query, which often do not even appear directly in the abstract. Third, it enables users to verify its classification because GO terms are highlighted in the abstracts and as each term is labelled with an accuracy percentage. Fourth, exploring PubMed abstracts with GoPubMed is useful as it shows definitions of GO terms without the need for further look up.

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GoPubMed classification

GoPubMed specifications

Unique identifier:
OMICS_01183
Restrictions to use:
None
Maintained:
No
Interface:
Web user interface
Computer skills:
Basic

GoPubMed support

Maintainer

This tool is not available anymore.

Credits

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Publications

Institution(s)

Biotechnological Center, Department of Computer Science TU Dresden, Germany

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