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Gossamer specifications

Information


Unique identifier OMICS_00017
Name Gossamer
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Computer skills Advanced
Stability No
Maintained No

Versioning


No version available

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Publication for Gossamer

Gossamer citation

library_books

Metagenomics of rumen bacteriophage from thirteen lactating dairy cattle

2013
PMCID: 3827882
PMID: 24180266
DOI: 10.1186/1471-2180-13-242

[…] phred quality score below 20, and no read contained more than three bases with a phred quality score below 15., sequence from all animals was computationally pooled and assembled into contigs using gossamer []. because of the complexity of metagenome samples, several assemblies were performed at different k-mer lengths. these assemblies were then further combined in a single gossamer assembly […]


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Gossamer institution(s)
NICTA Victoria Research Laboratory, Department of Computing and Information Systems, The University of Melbourne, Parkville, Victoria, Australia
Gossamer funding source(s)
Supported by the Australian Government’s Department of Communications; Information Technology and the Arts; Australian Research Council through Backing Australia’s Ability and ICT Centre of Excellence programs

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