GOstat pipeline

GOstat specifications


Unique identifier OMICS_04139
Name GOstat
Interface Web user interface
Restrictions to use None
Computer skills Basic
Stability Stable
Maintained Yes

Publication for GOstat

GOstat citation

PMCID: 3921077

[…] format for running annotatepeakinbatch to get the nearby genes for each file. subsequently, we ran getenrichedgo from chippeakanno on each output-annotated file from annotatepeakinbatch to get the gostat for each file.22,26 we imported the output files containing nearby genes to the database and used sql language for the subsequent steps. we filtered each file to get nearby genes with distance […]

GOstat institution(s)
Walter and Eliza Hall Institute of medical Research, Parkville, Vic, Australia

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