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Allows to organize and search metagenomic data. Meta-Storms is a system for database creation, indexing and searching for similar metagenomic samples. It includes database and index creation, metagenomic data query, database management and other functions which, together, could be beneficial for the maintenance and usage of metagenomic sample management, comparison and query. GPU-Meta-Storms, which implements the scoring function of Meta-Storms with non-recursive transformation, Compute Unified Device Architecture (CUDA)-based parallel programming and optimizations, is also available.

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Meta-Storms forum

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Meta-Storms classification

Meta-Storms specifications

Unique identifier:
OMICS_02187
Software type:
Package/Module
Restrictions to use:
None
Programming languages:
C++
Computer skills:
Advanced
Maintained:
No
Alternative name:
GPU-Meta-Storms
Interface:
Command line interface
Operating system:
Unix/Linux
Parallelization:
CUDA
Version:
1.2

Meta-Storms distribution

versioning

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Meta-Storms support

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Credits

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Publications

Institution(s)

Shandong Key Laboratory of Energy Genetics, CAS Key Laboratory of Biofuels and Bioenergy Genome Center, Computational Biology Group of Single Cell Center, Qingdao Institute of Bioenergy and Bioprocess Technology, Chinese Academy of Sciences, Qingdao, China

Funding source(s)

Supported by the grant of National Natural Science Foundation of China (No. 30870572, No. 61303161 and No. 61103167) and National High Technology Research and Development Program of China (863 Program) (No. 2014AA021502).

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