GramDist specifications
- Unique identifier:
- OMICS_20652
- Interface:
- Command line interface
- Operating system:
- Mac OS
- Version:
- 1.0
- Maintained:
- Yes
- Software type:
- Application/Script
- Restrictions to use:
- None
- Computer skills:
- Advanced
- Stability:
- Stable
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GramDist distribution
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GramDist support
Maintainer
- David J Russell <>
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Publications
-
(Russell et al., 2010)
A grammar-based distance metric enables fast and accurate clustering of large sets of 16S sequences.
BMC Bioinformatics.
PMID: 21167044 DOI: 10.1186/1471-2105-11-601 -
(Russell et al., 2008)
Grammar-based distance in progressive multiple sequence alignment.
BMC Bioinformatics.
PMID: 18616828 DOI: 10.1186/1471-2105-9-306
Institution(s)
Department of Electrical Engineering, University of Nebraska-Lincoln, Lincoln, NE, USA; Department of Food Science and Technology, University of Nebraska-Lincoln, Lincoln, NE, USA; Core for Applied Genomics and Ecology, University of Nebraska-Lincoln, Lincoln, NE, USA
Funding source(s)
Supported by National Institutes of Health (NIH) under grant K25AI068151.
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