GESS specifications

Information


Unique identifier OMICS_11282
Name GESS
Alternative name Graph-based Exon-Skipping Scanner
Software type Application/Script
Interface Command line interface
Restrictions to use None
Input format FASTQ, FASTA
Operating system Unix/Linux
Programming languages Python
Computer skills Advanced
Version 1.0
Stability Stable
Requirements PySam, Scipy, Numpy, MISO
Maintained Yes

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Maintainer


  • person_outline Victor Jin <>

GESS article

GESS institution(s)
Departments of Molecular Medicine, University of Texas Health Science Center at San Antonio, San Antonio, TX, USA; Department of Molecular and Cellular Biochemistry and the Comprehensive Cancer Center, The Ohio State University, Columbus, OH, USA; Department of Biomedical Informatics, The Ohio State University, Columbus, OH, USA; Genome Technology Branch, National Human Genome Research Institute, National Institutes of Health, Chinakville, MD, USA; Department of Epidemiology and Biostatistics, University of Texas Health Science Center at San Antonio, San Antonio, TX, USA
GESS funding source(s)
Department of Molecular Medicine, University of Texas Health Science Center, San Antonio; National Institutes of Health (NIH) [R01CA151979, U54CA113001]; Department of Defense [W81XWH-12-1-0615]

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