Graphle statistics

info info

Citations per year

Number of citations per year for the bioinformatics software tool Graphle
info

Tool usage distribution map

info info

Associated diseases

info

Popular tool citations

chevron_left Network visualization chevron_right
Want to access the full stats & trends on this tool?

Protocols

Graphle specifications

Information


Unique identifier OMICS_08969
Name Graphle
Software type Package/Module
Interface Graphical user interface
Restrictions to use None
Operating system Unix/Linux, Mac OS, Windows
Programming languages Java
Computer skills Medium
Stability No
Maintained No

Taxon


  • Plants and Fungi
    • Saccharomyces cerevisiae

Versioning


No version available

Maintainer


This tool is not available anymore.

Information


Unique identifier OMICS_08969
Name Graphle
Interface Web user interface
Restrictions to use None
Programming languages Java
Computer skills Basic
Stability No
Maintained No

Taxon


  • Plants and Fungi
    • Saccharomyces cerevisiae

Maintainer


This tool is not available anymore.

Publication for Graphle

Graphle citations

 (2)
call_split

Tissue Specific Functional Networks for Prioritizing Phenotype and Disease Genes

2012
PLoS Comput Biol
PMCID: 3459891
PMID: 23028291
DOI: 10.1371/journal.pcbi.1002694
call_split See protocol

[…] To allow dynamic visualization and cross-network comparison of our integration results, we developed the mouseMAP software (http://mouseMAP.princeton.edu), based on the open-source viewing framework Graphle that we developed in . MouseMAP is based on the Prefuse Java visualization library, the Args4j command line parsing tool, and the SQLiteJDBC SQLite database driver. The basic functionality of […]

library_books

A multilevel layout algorithm for visualizing physical and genetic interaction networks, with emphasis on their modular organization

2012
BioData Min
PMCID: 3342218
PMID: 22448851
DOI: 10.1186/1756-0381-5-2

[…] isticated methods for laying out networks. Such software packages, each providing a specific range of visualization options, include, e.g., VisANT, NAViGaTOR, PATIKA, PINA, MATISSE, GraphViz, Osprey, Graphle, CellDesigner, Biolayout, ProViz and Pajek; see [,,] and references therein. Among others, Cytoscape software platform for network analysis and visualization has been widely adopted by the bio […]


Want to access the full list of citations?
Graphle institution(s)
Department of Computer Science, Princeton University, Princeton, NJ, USA; Lewis-Sigler Institute for Integrative Genomics, Princeton University, Princeton, NJ, USA

Graphle reviews

star_border star_border star_border star_border star_border
star star star star star

Be the first to review Graphle