1. Directory
  2. Genomics
  3. Genome annotation
  4. Repetitive DNA
Join community Sign in
By using OMICtools you acknowledge that you have read and accepted the terms of the end user license agreement.

A user-friendly GUI-based toolbox for comprehensive graph-theoretical analyses of brain connectivity, including network construction and characterization, statistical analysis on network topological measures, network based statistics, and interactive exploration of results. GraphVar provides a comprehensive collection of graph analysis routines for analyses of functional brain connectivity in one single toolbox by combining features across multiple currently available toolboxes, such as the Brain Connectivity Toolbox, the Graph Analysis Toolbox, and the Network Based Statistic Toolbox.

Specifications

Software type:
Toolkit
Interface:
Command line interface, Graphical user interface
Restrictions to use:
None
Input data:
GraphVar accepts correlation matrices as input (or any n × n matrix containing information about connectivity among network nodes in .mat file format) but can also generate connectivity matrices based on Pearson correlation, partial correlation, spearman correlation, percentage bend correlation or mutual information from input time series.
Operating system:
Unix/Linux, Mac OS, Windows
Programming languages:
MATLAB
License:
GNU General Public License version 2.0
Computer skills:
Advanced
Stability:
Stable
View all reviews

0 user reviews

No review has been posted.

View all issues

0 issues

No open issue.

Documentation & support

Maintainer

  • J.D. Kruschwitz <johann.kruschwitz at charite.de>

Credits

Institution(s)

Charité – Universitätsmedizin Berlin, Division of Mind and Brain Research, Department of Psychiatry and Psychotherapy, Berlin, Germany

Publications

  • (Kruschwitz et al., 2015) GraphVar: a user-friendly toolbox for comprehensive graph analyses of functional brain connectivity. Journal of neuroscience methods.
    PMID: 25725332

Classification

  • Animals

17 related tools